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emerge --info

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$hostname / # emerge --autounmask-write -avuDN gnome

These are the packages that would be merged, in order:

Calculating dependencies... done!


[ebuild  N     ] gnome-base/gnome-3.12.0:2.0  USE="bluetooth cdr classic extras -accessibility -cups" 0 kB
[ebuild  N     ]  gnome-base/gnome-core-apps-3.12.0:3.0  USE="bluetooth cdr -cups" 0 kB
[ebuild  N     ]   x11-terms/gnome-terminal-3.12.3  USE="gnome-shell nautilus" 1,681 kB
[ebuild  N     ]  gnome-extra/gnome-shell-extensions-3.12.2  USE="-examples" 207 kB
[ebuild  N     ]   app-admin/eselect-gnome-shell-extensions-20120911  3 kB
[nomerge       ] x11-terms/gnome-terminal-3.12.3  USE="gnome-shell nautilus" 
[nomerge       ]  gnome-base/gnome-shell-3.12.2  USE="bluetooth i18n networkmanager (-openrc-force)" PYTHON_TARGETS="python2_7" 
[ebuild  N     ]   gnome-base/gnome-control-center-3.12.1-r1:2  USE="bluetooth colord cups gnome-online-accounts i18n -debug -kerberos -v4l" INPUT_DEVICES="-wacom" 6,706 kB
[ebuild  N     ]    gnome-extra/nm-applet-0.9.8.10-r1  USE="introspection -bluetooth -gconf -modemmanager" 1,206 kB
[nomerge       ] gnome-base/gnome-3.12.0:2.0  USE="bluetooth cdr classic extras -accessibility -cups" 
[ebuild  N     ]  gnome-base/gnome-extra-apps-3.12.0:3.0  USE="games shotwell tracker" 0 kB
[ebuild  N     ]   gnome-extra/gnome-tweak-tool-3.12.0  PYTHON_TARGETS="python2_7" 224 kB
[nomerge       ] gnome-extra/nm-applet-0.9.8.10-r1  USE="introspection -bluetooth -gconf -modemmanager" 
[ebuild  N     ]  virtual/notification-daemon-0  USE="gnome" 0 kB
[nomerge       ] gnome-base/gnome-3.12.0:2.0  USE="bluetooth cdr classic extras -accessibility -cups" 
[ebuild  N     ]  gnome-base/gdm-3.12.2  USE="introspection ipv6 systemd tcpd -accessibility -audit -branding -debug -fprint -plymouth (-selinux) -smartcard {-test} -wayland -xinerama" 1,487 kB
[ebuild  N     ]   gnome-base/gnome-shell-3.12.2  USE="bluetooth i18n networkmanager (-openrc-force)" PYTHON_TARGETS="python2_7" 1,505 kB

Total: 12 packages (12 new), Size of downloads: 13,017 kB

 * Error: circular dependencies:

(gnome-base/gnome-control-center-3.12.1-r1::gentoo, ebuild scheduled for merge) depends on
 (gnome-extra/nm-applet-0.9.8.10-r1::gentoo, ebuild scheduled for merge) (buildtime)
  (virtual/notification-daemon-0::gentoo, ebuild scheduled for merge) (buildtime)
   (gnome-base/gnome-shell-3.12.2::gentoo, ebuild scheduled for merge) (runtime)
    (gnome-base/gnome-control-center-3.12.1-r1::gentoo, ebuild scheduled for merge) (runtime)

It might be possible to break this cycle
by applying the following change:
- virtual/notification-daemon-0 (Change USE: -gnome)

Note that this change can be reverted, once the package has been installed.

Note that the dependency graph contains a lot of cycles.
Several changes might be required to resolve all cycles.
Temporarily changing some use flag for all packages might be the better option.

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It might be possible to break this cycle
by applying the following change:
- virtual/notification-daemon-0 (Change USE: -gnome)

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USE="-gnome" emerge --autounmask-write -avuDN gnome

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The following USE changes are necessary to proceed:
 (see "package.use" in the portage(5) man page for more details)
# required by gnome-extra/gnome-documents-3.12.1
# required by gnome-base/gnome-extra-apps-3.12.0[tracker]
# required by gnome-base/gnome-3.12.0[extras]
# required by gnome (argument)
=dev-libs/libgdata-0.14.3 gnome

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>>> Emerging (1 of 410) dev-libs/libyaml-0.1.6
 * Fetching files in the background. To view fetch progress, run
 * `tail -f /var/log/emerge-fetch.log` in another terminal.
>>> Downloading 'http://de-mirror.org/gentoo/distfiles/yaml-0.1.6.tar.gz'
--2014-12-09 17:11:32--  http://de-mirror.org/gentoo/distfiles/yaml-0.1.6.tar.gz
Resolving de-mirror.org... failed: Name or service not known.
wget: unable to resolve host address 'de-mirror.org'
>>> Downloading 'http://pyyaml.org/download/libyaml/yaml-0.1.6.tar.gz'
--2014-12-09 17:11:32--  http://pyyaml.org/download/libyaml/yaml-0.1.6.tar.gz
Resolving pyyaml.org... failed: Name or service not known.
wget: unable to resolve host address 'pyyaml.org'
!!! Couldn't download 'yaml-0.1.6.tar.gz'. Aborting.
 * Fetch failed for 'dev-libs/libyaml-0.1.6', Log file:
 *  '/var/tmp/portage/dev-libs/libyaml-0.1.6/temp/build.log'

>>> Failed to emerge dev-libs/libyaml-0.1.6, Log file:

>>>  '/var/tmp/portage/dev-libs/libyaml-0.1.6/temp/build.log'

 * Messages for package media-sound/pulseaudio-5.0-r4:

 * A preallocated buffer-size of 2048 (kB) or higher is recommended for the HD-audio driver!
 * CONFIG_SND_HDA_PREALLOC_SIZE=64

 * Messages for package dev-libs/libyaml-0.1.6:

 * Fetch failed for 'dev-libs/libyaml-0.1.6', Log file:
 *  '/var/tmp/portage/dev-libs/libyaml-0.1.6/temp/build.log'

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# These settings were set by the catalyst build script that automatically
# built this stage.
# Please consult /usr/share/portage/config/make.conf.example for a more
# detailed example.
CFLAGS="-O2 -march=i686 -pipe"
CXXFLAGS="${CFLAGS}"
# WARNING: Changing your CHOST is not something that should be done lightly.
# Please consult http://www.gentoo.org/doc/en/change-chost.xml before changing.
CHOST="i686-pc-linux-gnu"
# These are the USE flags that were used in addition to what is provided by the
# profile used for building.
USE="X libxml2 gtk gnome gudev sys-apps/systemd-215-r3 -qt4 -kde systemd sys-fs gtk3 sound alsa sqlite"
PORTDIR="/usr/portage"
DISTDIR="${PORTDIR}/distfiles"
PKGDIR="${PORTDIR}/packages"
MAKEOPTS="-j3"

GENTOO_MIRRORS="http://de-mirror.org/gentoo/"

SYNC="rsync://rsync.de.gentoo.org/gentoo-portage"
VIDEO_CARDS="intel"
INPUT_DEVICES="evdev synaptics"

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emerge --autounmask-write -avuDN gnome

These are the packages that would be merged, in order:

Calculating dependencies... done!

emerge: there are no ebuilds to satisfy ">=app-accessibility/at-spi2-atk-2.5.3".
(dependency required by "x11-libs/gtk+-3.12.2[X]" [ebuild])
(dependency required by "gnome-base/gvfs-1.20.2[gtk]" [ebuild])
(dependency required by "gnome-base/gnome-3.12.0" [ebuild])
(dependency required by "gnome" [argument])

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 * configure has detected that the sem_open function is broken.
 * Please ensure that /dev/shm is mounted as a tmpfs with mode 1777.
 * ERROR: dev-lang/python-2.7.7::gentoo failed (configure phase):
 *   Broken sem_open function (bug 496328)
 * 
 * Call stack:
 *     ebuild.sh, line  93:  Called src_configure
 *   environment, line 3857:  Called die
 * The specific snippet of code:
 *           die "Broken sem_open function (bug 496328)";
 * 
 * If you need support, post the output of `emerge --info '=dev-lang/python-2.7.7::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=dev-lang/python-2.7.7::gentoo'`.
 * The complete build log is located at '/var/tmp/portage/dev-lang/python-2.7.7/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/dev-lang/python-2.7.7/temp/environment'.
 * Working directory: '/var/tmp/portage/dev-lang/python-2.7.7/work/i686-pc-linux-gnu'
 * S: '/var/tmp/portage/dev-lang/python-2.7.7/work/Python-2.7.7'

>>> Failed to emerge dev-lang/python-2.7.7, Log file:

>>>  '/var/tmp/portage/dev-lang/python-2.7.7/temp/build.log'

 * Messages for package media-sound/pulseaudio-5.0-r4:

 * A preallocated buffer-size of 2048 (kB) or higher is recommended for the HD-audio driver!
 * CONFIG_SND_HDA_PREALLOC_SIZE=64

 * Messages for package dev-lang/python-2.7.7:

 * configure has detected that the sem_open function is broken.
 * Please ensure that /dev/shm is mounted as a tmpfs with mode 1777.
 * ERROR: dev-lang/python-2.7.7::gentoo failed (configure phase):
 *   Broken sem_open function (bug 496328)
 * 
 * Call stack:
 *     ebuild.sh, line  93:  Called src_configure
 *   environment, line 3857:  Called die
 * The specific snippet of code:
 *           die "Broken sem_open function (bug 496328)";
 * 
 * If you need support, post the output of `emerge --info '=dev-lang/python-2.7.7::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=dev-lang/python-2.7.7::gentoo'`.
 * The complete build log is located at '/var/tmp/portage/dev-lang/python-2.7.7/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/dev-lang/python-2.7.7/temp/environment'.
 * Working directory: '/var/tmp/portage/dev-lang/python-2.7.7/work/i686-pc-linux-gnu'
 * S: '/var/tmp/portage/dev-lang/python-2.7.7/work/Python-2.7.7'

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 * A preallocated buffer-size of 2048 (kB) or higher is recommended for the HD-audio driver!
 * CONFIG_SND_HDA_PREALLOC_SIZE=64